[OTDev] Are there some sample dataset services available ?
surajit ray mr.surajit.ray at gmail.comSun Feb 14 18:01:19 CET 2010
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Hi Nina, Are there any dataset available with the following fields, at any URI a) SMILE b) Any toxicity endpoint c) An identification no. for the molecule I kind of need a sample dataset service (in the API) format .... to make sure the Maxtox code can retrieve a dataset in the API enabled manner. Also, Could you please help me conceptualize how we would present our feature .... As of now I have made a "Fingerprinter Generator" which generates a dictionary(as discussed in an earlier mail) and a Fingerprinter Algorithm . This is done via POSTing a dataset to the generator. Later the generated Fingerprinter will generate a feature for a database (POSTed) to it .... This feature (for each molecule in the dataset ) , will be a long list of 1's and 0's and will have an associated dictionary and source set molecules (Question : Since not all compounds are not suitable for the graph search - we usually have a subset of a dataset as the source. Do we need to create a new dataset representation for the purpose of the generated fingerprinter ?) How can I represent this feature within the API ? Thanks for the help .... Surajit Ray
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