[OTDev] running Algorithm directly on a SD file?

Egon Willighagen egon.willighagen at gmail.com
Thu Apr 1 16:22:17 CEST 2010


On Wed, Mar 31, 2010 at 12:27 PM, Nina Jeliazkova <nina at acad.bg> wrote:
>> is it possible to run an OpenTox /algorithm directly on an SD or mol
>> file? Or should that always be uploaded as data set first?
>>
> The dataset should have an URI, so it should be uploaded, or the dataset
> constructed from existing compounds/features at a certain dataset service.

Must the URI point to an OpenTox API service? Or would a URI to just a
SD file work too?
Like http://example.org/someFile.sdf ?

Egon

-- 
Post-doc @ Uppsala University
Proteochemometrics / Bioclipse Group of Prof. Jarl Wikberg
Homepage: http://egonw.github.com/
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