[OTDev] validating web services

Martin Guetlein martin.guetlein at googlemail.com
Wed Apr 21 09:03:51 CEST 2010


Hi Pantelis,

when building a model, it seems that your service directly returns the
task object (See curl example below).
I think according to the API a task uri should be returned?

Best regards,
Martin


$ curl -d prediction_feature=\
"http://ambit.uni-plovdiv.bg:8080/ambit2/feature/103141" \
-d dataset_uri=\
"http://ambit.uni-plovdiv.bg:8080/ambit2/dataset/342"\
http://opentox.ntua.gr:3003algorithm/mlr

->

<rdf:RDF
    xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
    xmlns:ot="http://www.opentox.org/api/1.1#"
    xmlns:ota="http://www.opentox.org/algorithmTypes.owl/#"
    xmlns:owl="http://www.w3.org/2002/07/owl#"
    xmlns:dc="http://purl.org/dc/elements/1.1/"
    xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
    xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" >
  <rdf:Description
rdf:about="http://purl.org/dc/elements/1.1/relation">
    <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AnnotationProperty"/>
  </rdf:Description>
  <rdf:Description
rdf:about="http://purl.org/dc/elements/1.1/identifier">
    <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AnnotationProperty"/>
  </rdf:Description>
  <rdf:Description
rdf:about="http://purl.org/dc/elements/1.1/contributor">
    <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AnnotationProperty"/>
  </rdf:Description>
  <rdf:Description
rdf:about="http://www.opentox.org/api/1.1#hasStatus">
    <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#DatatypeProperty"/>
  </rdf:Description>
  <rdf:Description rdf:about="http://purl.org/dc/elements/1.1/rights">
    <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AnnotationProperty"/>
  </rdf:Description>
  <rdf:Description
rdf:about="http://purl.org/dc/elements/1.1/creator">
    <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AnnotationProperty"/>
  </rdf:Description>
  <rdf:Description rdf:about="http://www.opentox.org/api/1.1#Task">
    <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#Class"/>
  </rdf:Description>
  <rdf:Description rdf:about="http://purl.org/dc/elements/1.1/date">
    <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AnnotationProperty"/>
  </rdf:Description>
  <rdf:Description
rdf:about="http://opentox.ntua.gr:3003/task/4982aa8d-ed3e-4954-a76a-2807e46a123f">
    <dc:title rdf:datatype="http://www.w3.org/2001/XMLSchema#string">YAQP
Task</dc:title>
    <dc:contributor
rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://opentox.org</dc:contributor>
    <ot:hasStatus
rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Running</ot:hasStatus>
    <dc:source rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://opentox.ntua.gr:3003</dc:source>
    <dc:relation
rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://opentox.org</dc:relation>
    <dc:creator
rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://opentox.ntua.gr:3003</dc:creator>
    <dc:publisher
rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://opentox.ntua.gr:3003</dc:publisher>
    <dc:identifier
rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://opentox.ntua.gr:3003/task/4982aa8d-ed3e-4954-a76a-2807e46a123f</dc:identifier>
    <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#date">Wed
Apr 21 02:48:30 EDT 2010</dc:date>
    <dc:rights rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://www.gnu.org/licenses/</dc:rights>
    <rdf:type rdf:resource="http://www.opentox.org/api/1.1#Task"/>
  </rdf:Description>
  <rdf:Description
rdf:about="http://purl.org/dc/elements/1.1/publisher">
    <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AnnotationProperty"/>
  </rdf:Description>
  <rdf:Description
rdf:about="http://www.w3.org/1999/02/22-rdf-syntax-ns#type">
    <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AnnotationProperty"/>
  </rdf:Description>
  <rdf:Description rdf:about="http://purl.org/dc/elements/1.1/source">
    <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AnnotationProperty"/>
  </rdf:Description>
  <rdf:Description rdf:about="http://purl.org/dc/elements/1.1/title">
    <rdf:type rdf:resource="http://www.w3.org/2002/07/owl#AnnotationProperty"/>
  </rdf:Description>
</rdf:RDF>







On Tue, Apr 20, 2010 at 5:08 PM, chung <chvng at mail.ntua.gr> wrote:
> Dear Martin, All,
>  I have made some changes regarding the NTUA services to provide full
> compatibility with the recent changes in the Task API. I was a bit
> dubious as to whether I should deploy the new version of the services
> lest these would ruin the integration with ToxPredict. So I deployed the
> latest version of YAQP on another URI: http://opentox.ntua.gr:3003 (Note
> the different port: its 3003 instead of 3000).
>
> @Martin: Could you please try the validation services using the above
> URI? (Hope this works...). Note that there are some changes as far as
> the redirections are concerned! Let me know if you encounter any
> problems and we'll be in touch to make the services work.
>
> @Nina: Could you please check if the new services are compliant with the
> new API (status codes, response messages, RDF content etc)? Then we
> could officially switch to the new API.
>
> Best regards,
> Pantelis
>
> On Mon, 2010-04-19 at 18:29 +0200, Martin Guetlein wrote:
>> Dear All,
>>
>> I created a new website that makes it easier for you to get your
>> models and the validation web service working together:
>> http://opentox.informatik.uni-freiburg.de/validation/nightly
>> This website is for developers of OT web services and shows the
>> results of a daily validation of your model web service/s. So far it
>> is only a first initial version, it will be extended further.
>>
>> To all developers: please send to me URIs of models and/or datasets to
>> extend the tests.
>>
>> Best regards,
>> Martin
>>
>>
>
>
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> Development at opentox.org
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>



-- 
Dipl-Inf. Martin Gütlein
Phone:
+49 (0)761 203 8442 (office)
+49 (0)177 623 9499 (mobile)
Email:
guetlein at informatik.uni-freiburg.de



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