[OTDev] [IMPT] RDF for QPRF/QMRF reports
Martin Guetlein martin.guetlein at googlemail.comThu Jul 15 08:39:07 CEST 2010
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Hi Pantelis, All, I have a general question considering the Reach report formats (QMRF/QPRF). I am wondering whether I should store each field of the report (like e.g. qprf_report_xy/substance/structure_codes/SMILES), or whether it is enough to only store links to the OpenTox-Resources like compound_uri (further information could be retrieved from the compound service). (This was not totally clear from your suggestion, on slide 9 you wrote that the compound identifiers like Smiles should be available in the report, without more detailed specification.) The first approach, storing mainly links to resources, would assure that the report is consistent, and that there is no redundant information. However the user can make changes only to certain fields, and the report depends on other services.(This would require many changes to the QMRF editor). The other approach, storing each field, would lead to some redundant information, but it would leave it to the user to make comments, and add additional info to all fields (This is how it is implemented in the QMRF editor). We of course could guide the user in the editors, still the report could be inconsistent. I prefer the second approach. What do you think? Regards, Martin On Wed, Jul 14, 2010 at 3:36 PM, chung <chvng at mail.ntua.gr> wrote: > Hi All, > > Find attached an updated version... > > On Wed, 2010-07-14 at 15:47 +0300, chung wrote: > >> Dear Martin, All, >> Please find attached a proposal about the structure of a data model for >> a QPRF report. Please take a close look in comparison with the JRC >> specifications and check if there are any missing properties. Note that >> this is a first draft and probably it will need modifications. What we >> need to do next is update the OpenTox OWL file according to the >> requirements of QPRF reports. I modified a bit the GUI to resemble with >> the structure of the QPRF report (using sections and subsections). >> I also attach a progress report of ours I had prepared for our last >> meeting. >> >> Cheers, >> Pantelis >> _______________________________________________ >> Development mailing list >> Development at opentox.org >> http://www.opentox.org/mailman/listinfo/development > > > > _______________________________________________ > Development mailing list > Development at opentox.org > http://www.opentox.org/mailman/listinfo/development > > -- Dipl-Inf. Martin Gütlein Phone: +49 (0)761 203 8442 (office) +49 (0)177 623 9499 (mobile) Email: guetlein at informatik.uni-freiburg.de
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