Dear Developers,

this is to inform you about some recent developments on reach reporting and
validation.

* The creation of QMRF reports now adds validation info (in case the
model/algorithm was validated before) to sections 6.9 and 7.7 of the report.
Validation datasets are added to the attachment part of the report.

* Andreas Karwath was further able to extend Ambits QMRF editor such that it
is possible to directly edit QMRF reports (via Java Webstart) that are
located on our
report web service.

* Bootstrapping validation is now available.

See curl/browser examples below.

Best regards,
Martin Gütlein



create report from model:
-------------------------------------------------------------------
curl -d model_uri=http://opentox.informatik.uni-freiburg.de/model/1
http://opentox.informatik.uni-freiburg.de/validation/reach_report/QMRF

(this now returns a task-uri, find the report URI in the 'resultURI'
property of the task, as soon as the task is completed)


directly view and edit the qmrf-report:
-------------------------------------------------------------------
http://opentox.informatik.uni-freiburg.de/validation/reach_report/QMRF/17/editor

(visit with a browser that can handle Java webstart applications)


validate an algorithm on a dataset via bootstrapping
-------------------------------------------------------------------

curl -X POST -d algorithm_uri="
http://opentox.informatik.uni-freiburg.de/algorithm/lazar"
 -d dataset_uri="http://opentox.informatik.uni-freiburg.de/dataset/1"
 -d prediction_feature="
http://localhost/toxmodel/feature%23Hamster%2520Carcinogenicity%2520(DSSTOX/CPDB)
"
 -d algorithm_params="feature_generation_uri=
http://opentox.informatik.uni-freiburg.de/algorithm/fminer"
 -d random_seed=2
 http://opentox.informatik.uni-freiburg.de/validation/bootstrapping


--
Dipl-Inf. Martin Gütlein
Phone:
+49 (0)761 203 8442 (office)
+49 (0)177 623 9499 (mobile)
Email:
guetlein at informatik.uni-freiburg.de