[OTDev] Errors and warnings in datasets
Christoph Helma helma at in-silico.chMon Oct 11 18:51:21 CEST 2010
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Excerpts from Nina Jeliazkova's message of Mon Oct 11 17:27:14 +0200 2010: > Christoph, > > Could you tell what kind of errors (parsing of SMILES ?) would you like to > store into metadata? Is it possible to provide examples? It will be a mixed bag of SMILES errors, duplicated structures, incorrect activity entries, .... Examples can be found e.g. at http://toxcreate.org/models under "Warnings: show". Simple string annotation for concatenated error/warning messages could be sufficient. > There is a proposal for errors representation > http://opentox.org/dev/apis/api-1.1/Error%20Reports , but the objective was > to report errors from processing services ( algorithms and models) and I am > not quite sure it is applicable. Yes, this is a different story. During dataset parsing I try to parse as much information as possible and to present errors/warnings later. Best regards, Christoph
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