On Fri, Oct 29, 2010 at 1:33 PM, Nina Jeliazkova
<jeliazkova.nina at gmail.com> wrote:
> On 29 October 2010 14:00, Christoph Helma <helma at in-silico.ch> wrote:
>> I have talked at the final Sensitiv meeting with a Bioinformatician who
>> would be interested in using OpenTox services from R. I am sure that
>> this is possible, but it would require some efforts to map R's
>> datastructures (data frames, ...) to OpenTox datasets. Unfortunatly I
>> cannot devote much time to this - are there any volunteers?
>
> We were just discussing similar idea this week. We've started quite recently
> to explore R . Data frames seem to have similar table (row/columns)
> structure to OpenTox datasets, and it is possible to call Java code from R,
> so it should be feasible to have OpenTox client written in Java and call it
> from R.

Chemistry handling can be done with Rajarshi's rcdk...

Egon


-- 
Dr E.L. Willighagen
Postdoctoral Research Associate
University of Cambridge
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