[OTDev] validation search functions with model
Christoph Helma helma at in-silico.chWed Aug 24 14:23:34 CEST 2011
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On Wed, 24 Aug 2011 14:28:40 +0300, Nina Jeliazkova <jeliazkova.nina at gmail.com> wrote: Non-text part: multipart/alternative > Dear Christoph, > > On 24 August 2011 14:18, Christoph Helma <helma at in-silico.ch> wrote: > > > Dear Nina, > > > > I am not sure if Martin has replied already: > > > > > > > > > http://opentox.informatik.uni-freiburg.de/validation is the "official" > > validation service for all partners. For better load balancing we deploy > > additional services, e.g. webservices.in-silico.ch/validation for > > toxcreate.org, > > ot-test.in-silico.ch/validation for ot-test.in-silico.ch > > and most recently lazar-services.in-silico.ch/validation for > > lazar.in-silico.ch. > > > > Thank you. As ToxPredict operates with arbitrary model URIs, what we the > best way to find out where the validation (and reporting ) resources for > particular model resides ? The question concerns not only models, built by > ToxCreate , but any models, registered in the ontology service (and thus > used by ToxPredict). > > Perhaps we should agree on some linking between model , validation and > reports, if these don't exist already? Yes. We are currently storing these associations within ToxCreate, but a common OpenTox mechanism would be very useful. At present we can trace back from reports to validations to models (@Martin please correct me if I am wrong), but not the other way round. I can see the following options: - Register reports instead of models in the Ontology service (not very intuitive) - Add validation/report URIs to model metadata (at present our services prohibit modifications of models after creation to avoid invalidation of validation results) - Store association between models, validations and reports at the Ontology service Best regards, Christoph
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