[OTDev] OpenTox Association, purpose and benefits
Barry Hardy barry.hardy at douglasconnect.comSat Mar 7 00:27:33 CET 2015
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Notes from today's OpenTox meeting with an emphasis on advancing development/industrialisation and ideas on WGs below. Next meeting: 16.30 CET (i.e., 3.30pm London, 10.30am New York) 13 March Instructions for joining at bottom of email. Don't forget to complete the forms on your interest and on joining the founding meeting! best regards Barry A) Form to express interest in membership, taking a work role, joining a working group etc: http://www.opentox.com/opentoxorg-foundation b) Form to indicate which dates you could make for a founding meeting: http://doodle.com/9zc23zia8twxc99v OpenTox Association Meeting Notes 6 March 2015 Discussion between: James Sluka, Micha Rautenburg, David Gallagher, Tim Dudgeon, Jeff Wisemam, Gladys Ouedraogo, Markus Hegi, Barry Hardy Development/Industrialisation - need to advance industrialisation of OpenTox tools - move SW from R&D to good end user tools - will we provide consulting, support, how, different to R&D approach - business case of regulators needing OS software for legal situations - need for local installation of OpenTox SW at commercial organisations - potential for secure cloud solutions gaining acceptance - importance of security/confidentiality with industry - need for an addition of quality to OS release to industry: e.g., support, documentation - provide better documentation, guidance to new developers getting started - Address sustainability issues: current inadequate funding models (both US and EU), talk to regulatory agencies and goverments on better longer term infrastructure investments sustaining data resources in toxicology/exposure. Lobbying needed by exec committee. - need for business model beyond R&D projects - need to cover data sets where tech and data structures changing frequently e.g., next gen omics - advantage of openness and transparency for regulatory legal situations "Google" Issues - no-indexing of xml files - current issue of going to different databases, not just having data available, no matter where it is located Potential Working Groups 1) API WG: Goal - Update to OpenTox API (Christoph Helma interested in taking a lead role) 2) Deployment WG; Deployment and Installation of OpenTox SW, Directory of Services (Tim Dudgeon interest in lead) 3) Ontology WG: Continued development of Tox Ontology (James Sluka interest) 4) User WG? Outreach & Needs. How would it be structured? Different sub groups with different interests e.g., REACH, Alternative Methods 5) "Radical Data" WG: will advance with innovative methods ways of getting into OpenTox and available (James, Barry) 6) Quality WG: e.g., code review, support models, protocols, curation, AOp development Cool Idea - advance data input into OpenTox with data processing workflows including extraction, automatic service installation, crowdsourcing (James, Barry to followup on)
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