[OTDev] Compound API

Egon Willighagen egon.willighagen at gmail.com
Fri Nov 6 13:20:16 CET 2009


On Fri, Nov 6, 2009 at 12:58 PM, Christoph Helma <helma at in-silico.de> wrote:
> Excerpts from Egon Willighagen's message of Fri Nov 06 12:42:05 +0100 2009:
>> Finally, I would suggest JSON to be added to the list of (optional)
>> output formats, which makes it easy to use the OpenTox API from
>> JavaScript libraries...
>
> JSON will be an output format for datasets. Are there any commonly
> accepted representations of chemical structures in JSON (or YAML)?

No, not at this moment... I have a patch that reads and writes the CDK
IMolecule data model into/from RDF, and RDF can easily be converted
into JSON...

But when I asked, I was thinking about meta data in the first place...

Egon

-- 
Post-doc @ Uppsala University
Homepage: http://egonw.github.com/
Blog: http://chem-bla-ics.blogspot.com/
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