[OTDev] Techie Table
Barry Hardy barry.hardy at douglasconnect.comTue Sep 7 09:58:30 CEST 2010
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Re: Techie Table in Rhodes - Might be also good to specify experience required of participants e.g., programming languages, and level - I would avoid if at all possible working on installation work at the workshop. You could offer virtual support pre-workshop to fix problems. - As participants are staying on in Rhodes for a few days for the meeting, some of you could continue to interact and offer support as needed Barry Am 07.09.2010 09:00, schrieb Tobias Girschick: > Hi Pantelis, > > first of all, I like the partitioning into two parts. In the first part > participants can get a feeling for the OT API and in the second they can > make use of it. > Overall I guess your time estimates are very (very) optimistic. You have > to keep in mind, that we don't know the exact programming skills of the > participants and that that haven't worked with our - still not > sufficiently documented - API at all. > > best regards, > Tobias > > On Mon, 2010-09-06 at 18:22 +0300, chung wrote: >> Hello All, >> I'm sending out some notes/thoughts about the Techie Table >> >> @All: >> I'm thinking of organizing the discussion and presentation in two >> parts. In the first we are going to show how a developer can consume >> OpenTox web services from inside a Java application using some tools of >> ours. This will include some A&A also. Using web clients and parsers, >> the participants will download and parse OpenTox resources such as >> compounds, features, datasets and models and inspect them from within >> their Java application. Exercises will include parsing of datasets and >> conversion into weka data objects (Instances), training of various >> models using NTUA, TUM and AMBIT algorithms (where necessary using also >> the A&A API). So this will familiarize the participants with the direct >> consumption of OT web services on a more advanced level than using web >> interfaces and a more programmatic way than using plain curl. This will >> take about 45 minutes including discussion/questions. >> In the second part, I'm thinking of having the audience building an >> OpenTox web service with some guidance. We will design and deploy a >> clustering algorithm for the sake of getting in touch with web services >> and having a better insight into the OpenTox API. First we will study >> the requirements of the OT API and will formulate hypothetical curl >> commands for how a request would look like (In a top-down approach). >> Then we will proceed formulating an RDF representation of the algorithm >> discussing at the same time about the structure of such a document and >> the information that should be found therein. Jena will be used as an >> RDF editor/parser, which will be quite useful to developers that want to >> get involved into any contemporary project (web semantics etc). We will >> not get into much detail as far as the storing of models is concerned >> but briefly we'll present the underlying database tables structure. Weka >> will be used to materialize the XMeans algorithm. The whole effort will >> boil down to just about 500 lines of source code including the use of >> various Java libraries such as Restlet, Weka, Jena and DeciBell. This >> will take about 75' and the rest of the time we will discuss about >> various challenges a developer can take. >> >> I'll be sending you a list of what should a participant have installed >> by the end of the day. If any participants experience problems >> installing any of the libraries/tools/programs in the list, we'll do it >> together on the table. >> >> Best regards, >> Pantelis >> >> _______________________________________________ >> Development mailing list >> Development at opentox.org >> http://www.opentox.org/mailman/listinfo/development
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