[OTDev] ToxCreate integration of Ambit classification datasets

Christoph Helma helma at in-silico.ch
Wed Mar 23 13:25:00 CET 2011


Nina,

> 
> If you look at /dataset/9  RDF  representation, there is ot:acceptValue  in
> RDF representation, which lists possible values for the feature. This was
> agreed for API 1.1 and is in the opentox.owl , and is used by TUM/NTUA
> services as far as I know.
> 
> <http://apps.ideaconsult.net:8080/ambit2/feature/21573>
>       a       ot:Feature , ot:NumericFeature , ot:NominalFeature ;
>       dc:creator "http://www.epa.gov/NCCT/dsstox/sdf_isscan_external.html" ;
>       dc:title "Canc" ;
>       ot:acceptValue "3.0" , "1.0" ;
>       ot:hasSource <
> http://apps.ideaconsult.net:8080/ambit2/dataset/ISSCAN_v3a_1153_19Sept08.1222179139.sdf>
> ;
>       ot:units "" ;
>       =       otee:Carcinogenicity .
> 
> I would suggest modifying your implementation to use ot:acceptValue, instead
> of regexp.

Oops, I forgot about this one. Is ot:acceptValue ordered, i.e. can I
trust, that the first value indicates always true/active and the second
one false/inactive?

Best regards,
Christoph



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