Hi Pantelis,

I've noticed NTUA models don't return dc:title in the model representation.
This is used in ToxPredict to show a short name of the model.  Would it be
possible to assign one, or perhaps let the user/creator update the title?

Best regards,
Nina


On 12 April 2011 19:07, chung <chvng at mail.ntua.gr> wrote:

> Hi Vedrin, All,
>
>    The latest version of jaqpot3 is up and running at
> http://opentox.ntua.gr:8080/ . I'll provide here some cURL requests
> which Vedrin could use to update smokeping:
>
> 0. First acquire a token
> export jaqpot_username=guest
> export jaqpot_pass=guest
> export token=`curl -X POST -k
> 'https://opensso.in-silico.ch:443/auth/authenticate?uri=service=openldap'
> -d username=$jaqpot_username -d password=$jaqpot_pass`;
> token=`echo $token | cut -c10-80`
>
>
> 1. List the 1000 first bibtex entries
> curl -H Accept:text/uri-list
> 'http://opentox.ntua.gr:8080/bibtex?max=1000' -H subjectid:$token
>
> 2. List all models
> curl -H Accept:text/uri-list http://opentox.ntua.gr:8080/model -H
> subjectid:$token
>
> 3. List all tasks
> curl -H Accept:text/uri-list http://opentox.ntua.gr:8080/task -H
> subjectid:$token
>
> 4. Get the RDF representation of a task:
> curl -H Accept:application/rdf+xml
> http://opentox.ntua.gr:8080/task/048aa8d1-3592-4095-bf9a-d5342e538ba9 -H
> subjectid:$token
>
> 5. Get the RDF representation of a model:
> curl -X GET
> http://opentox.ntua.gr:8080/model/092ba2bc-e7d8-4eda-8259-3789065e1d57
> -H subjectid:$token
>
> 6. Train a model (requires authentication):
> curl -X POST -d
> dataset_uri=http://apps.ideaconsult.net:8080/ambit2/dataset/54 -d
> prediction_feature=http://apps.ideaconsult.net:8080/ambit2/feature/22202
> http://opentox.ntua.gr:8080/algorithm/mlr -H Accept:text/uri-list -H
> subjectid:$token
> curl -X POST -d
> dataset_uri=http://apps.ideaconsult.net:8080/ambit2/dataset/54 -d
> prediction_feature=http://apps.ideaconsult.net:8080/ambit2/feature/22202
> http://opentox.ntua.gr:8080/algorithm/svm -H Accept:text/uri-list -H
> subjectid:$token
> curl -X POST -d
> dataset_uri=http://apps.ideaconsult.net:8080/ambit2/dataset/54 -d
> prediction_feature=http://apps.ideaconsult.net:8080/ambit2/feature/22202
> http://opentox.ntua.gr:8080/algorithm/fastRbfNn -H Accept:text/uri-list
> -H subjectid:$token
> curl -X POST -d
> dataset_uri=http://apps.ideaconsult.net:8080/ambit2/dataset/54 -d
> prediction_feature=http://apps.ideaconsult.net:8080/ambit2/feature/22202
> http://opentox.ntua.gr:8080/algorithm/scaling -H Accept:text/uri-list -H
> subjectid:$token
>
> 7. Use a model for prediction:
>
> export
> svmModel=
> http://opentox.ntua.gr:8080/model/d488d65f-322d-4af4-b847-1ed6c2dc05be
> curl -X POST -H subjectid:$token -d
> "dataset_uri=http://apps.ideaconsult.net:8080/ambit2/dataset/54?max=10"
> $svmModel -H Accept:text/uri-list
>
> export
> fastRbfNnModel=
> http://opentox.ntua.gr:8080/model/1d34aaa8-2b8c-4c0b-a95a-8a439fcfcce1
> curl -X POST -H subjectid:$token -d
> "dataset_uri=http://apps.ideaconsult.net:8080/ambit2/dataset/54?max=10"
> $fastRbfNnModel -H Accept:text/uri-list
>
> export
> mlrModel=
> http://opentox.ntua.gr:8080/model/d8572c7e-b453-485e-99bd-ed3772a5463b
> curl -X POST -H subjectid:$token -d
> "dataset_uri=http://apps.ideaconsult.net:8080/ambit2/dataset/54?max=10"
> $mlrModel -H Accept:text/uri-list
>
>
> 8. Create a bibliographic reference
> curl -X POST -d "author=John Smith" -d "title=Title" -d "address=10,
> Some Street" -d
> "crossref=
> http://opentox.ntua.gr:8080/bibtex/faca253c-37fa-42e1-8d04-0a2239f84c8f"
> -d "annotation=some annotation" -d bibtype=Article -d "pages=1455-1489" -d
> "abstract=summary" -d year=2011 -d volume=10 -d number=6 -d "journal=Intern.
> Journal of Something" -d "series=xyz" -d "url=
> http://someserver.com/reference/1" -d chapter=10 -d "keywords=QSAR,web
> services" -d edition=first -d "isbn=89-9-4325-123-43-34" -d "issn=0-0-0-0"
> http://opentox.ntua.gr:8080/bibtex -H subjectid:$token -H
> Accept:text/uri-list
>
>
> 9. You can now access the plain text representation of the bibtex entry
> you created:
>
> curl
> '
> http://opentox.ntua.gr:8080/bibtex/160fa0cb-d749-4d21-a66c-eac54d5cffc4?accept=text/plain'
>  -H subjectid:$token
>
> 10. Some statistics regarding the database are available in XML at
> http://opentox.ntua.gr:8080/dbstats
>
> Best regards,
> Pantelis
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