On Fri, May 6, 2011 at 3:23 PM, Nina Jeliazkova
<jeliazkova.nina at gmail.com>wrote:

> Hi Martin,
>
>
> On 6 May 2011 15:57, Martin Guetlein <martin.guetlein at googlemail.com>wrote:
>
>>
>>
>> Hi Nina,
>>
>> I noticed the following, the property ot:acceptValue of feature/21573 is
>> available here:
>>
>> curl http://apps.ideaconsult.net:8080/ambit2/dataset/9 -H
>> "accept:application/turtle"
>>
>>    <ot:Feature rdf:about="
>> http://apps.ideaconsult.net:8080/ambit2/feature/21573">
>>     <rdf:type rdf:resource="http://www.opentox.org/api/1.1#NominalFeature
>> "></rdf:type>
>>     <ot:acceptValue>3.0</ot:acceptValue>
>>     <ot:acceptValue>1.0</ot:acceptValue>
>>     <ot:acceptValue>2.0</ot:acceptValue>
>>     <rdf:type rdf:resource="http://www.opentox.org/api/1.1#NumericFeature
>> "></rdf:type>
>>     <dc:creator>http://www.epa.gov/NCCT/dsstox/sdf_isscan_external.html
>> </dc:creator>
>>     <ot:hasSource>ISSCAN_v3a_1153_19Sept08.1222179139.sdf</ot:hasSource>
>>     <owl:sameAs rdf:resource="
>> http://www.opentox.org/echaEndpoints.owl#Carcinogenicity"></owl:sameAs>
>>     <ot:units></ot:units>
>>     <dc:title>Canc</dc:title>
>>
>> but its missing here:
>>
>> curl http://apps.ideaconsult.net:8080/ambit2/dataset/9/features -H
>> "accept:application/turtle"
>>
>>   <ot:NumericFeature rdf:about="feature/21573">
>>     <dc:creator>http://www.epa.gov/NCCT/dsstox/sdf_isscan_external.html
>> </dc:creator>
>>     <ot:hasSource
>> rdf:resource="dataset/ISSCAN_v3a_1153_19Sept08.1222179139.sdf"/>
>>     <owl:sameAs rdf:resource="
>> http://www.opentox.org/echaEndpoints.owl#Carcinogenicity"/>
>>     <ot:units></ot:units>
>>     <dc:title>Canc</dc:title>
>>     <rdf:type rdf:resource="http://www.opentox.org/api/1.1#NominalFeature
>> "/>
>>     <rdf:type rdf:resource="http://www.opentox.org/api/1.1#Feature"/>
>>   </ot:NumericFeature>
>>
>> I would need acceptValue for validation purposes (and our dataset parsing
>> routine uses the latter request for feature metadata). Could you fix that?
>>
>>
> It will be not trivial, because ot:acceptValue depends on the dataset ...
> You do receive the acceptValue when receiving the dataset though, so you
> should have this information.
>
> Nina
>
>
Hmm, but should not the acceptValue (e.g. the domain of a nominal feature)
be independent of a dataset?

I already noticed that your implementation works differently, as the accept
value of the feature differs when limiting the number of compounds (
http://apps.ideaconsult.net:8080/ambit2/dataset/9?max=1<http://apps.ideaconsult.net:8080/ambit2/dataset/9>instead
of http://apps.ideaconsult.net:8080/ambit2/dataset/9
) <http://apps.ideaconsult.net:8080/ambit2/dataset/9>

Best regards,
Martin




-- 
Dipl-Inf. Martin Gütlein
Phone:
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