[OTDev] combine AD and prediction algorithms
Martin Guetlein martin.guetlein at googlemail.comMon Jan 2 12:17:27 CET 2012
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On Mon, Jan 2, 2012 at 11:45 AM, Nina Jeliazkova <jeliazkova.nina at gmail.com>wrote: > Hi Martin,All, > > Happy new year to all! > > On 2 January 2012 12:24, Martin Guetlein <martin.guetlein at googlemail.com > >wrote: > > > Hi all, > > > > First of all, I wish you all a happy new year 2012. > > > > We want to use generic OpenTox prediction models. Alongside the normal > > prediciton value, we want to get a measure of how well the predicted > > compound fits the AD of training dataset (similar to the lazar > confidence). > > > > Did someone try this before? > > @Nina, is it possible to use this service for that:? > > http://apps.ideaconsult.net:8080/ambit2/algorithm/superservice > > > Yes, it should be possible. AD are regular OpenTox algorithms/models, just > replace the model URI with AD model URI. > Great, I'll give it a try. > > > > > > > > In case there is nothing availble yet, I would try to wrap a prediction > > algorithm and one of ambits AD algorithms: > > > > > http://apps.ideaconsult.net:8080/ambit2/algorithm?type=http%3A%2F%2Fwww.opentox.org%2FalgorithmTypes.owl%23AppDomain > > Any thoughts / opinions on this approach? > > > > Fine, if it suits your purposes. > > Just to remind AD algorithms here are not dependent of the model itself, > only on the training set. E.g. having trained an AD algorithm with a > given dataset, you'll get the same results , regardless of the model used. > Sure. The AD algorithm and the prediction algorithm have to use the identical features, otherwise it makes no sense. Best regards, Martin > > Best regards, > Nina > > > > > > Best regards, > > Martin > > > > -- > > Dipl-Inf. Martin Gütlein > > Phone: > > +49 (0)761 203 7633 (office) > > +49 (0)177 623 9499 (mobile) > > Email: > > guetlein at informatik.uni-freiburg.de > > _______________________________________________ > > Development mailing list > > Development at opentox.org > > http://www.opentox.org/mailman/listinfo/development > > > _______________________________________________ > Development mailing list > Development at opentox.org > http://www.opentox.org/mailman/listinfo/development > -- Dipl-Inf. Martin Gütlein Phone: +49 (0)761 203 7633 (office) +49 (0)177 623 9499 (mobile) Email: guetlein at informatik.uni-freiburg.de
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