[OpenTox Association] Working Group Virtual Meetings

Tim Dudgeon tdudgeon.ml at gmail.com
Mon Sep 14 11:09:39 CEST 2015


All,

As mentioned in Thomas' email we are wanting to create a "registry" of 
all OpenTox resources (services and data), and I have created a Google 
spreadsheet to allow us to get this underway (it will likely be replaced 
with something better later).
The link did not come through correctly in Thomas' email, so here it is:
https://docs.google.com/spreadsheets/d/13RlxLQWunwJAvvjPQWDSciokUnZQhz0vCQyMyBt4jNI/edit#gid=0

If you have any resources that you think relevant please add them to the 
sheet.
Also, if you think additional columns/fields would be useful please add 
them.
Please help to get something reasonably complete in place in time for 
Dublin.

Thanks
Tim


On 11/09/2015 20:43, Thomas Exner wrote:
> Dear all:
>
> And here the summary for working group 1 (APIs) and 4 (deployment).
>
> Looking forward to see as many as possible of you in Dublin.
> Thomas
>
>
> Joint meeting of WG1 + WG4 on 9-SEP-2015
>
> WG1 related aspects:
> Discussion will be held in Dublin to condition the APIs towards large 
> data sets  .
> Use of RDF not favoured now, probably will be replaced with JSON
> Main emphasis needs to be on the data structures, what is provided and 
> not how it is provided. Technical implementation will be guided by the 
> needs of interchangeable data formats.
> Incorporation of experience from other projects like ToxBank and 
> eNanoMapper, others have to be identified
>
> WG4 related aspects:
> Goals and activities in the Working group overview were agreed.
> A shared google sheet was set up to create an initial directory of 
> OpenTox services and data (see here). Everyone is encouraged to fill 
> in relevant information. A better solution would be desirable in the 
> longer term that facilitated ensuring the information was kept up to 
> date (e.g. checking if the service is still running, and stating when 
> the code repository was last updated).
> We do not yet have participants from two of the original OpenTox 
> developers: Nina Keliazkova’s and Stefan Kramer’s groups. Including 
> their expertise in the working group activities is highly desired.
> Yanli Wang from PubChem attended and pointed out the resources at 
> PubChem. We will want to discuss whether/how to access non-OpenTox 
> compliant services like these.
>
> During the Dublin meeting we will initially combine the working 
> groups, and break out into separate groups as necessary.
>
>
>
>> Thomas Exner schrieb:
>>> Hi all:
>>>
>>> Please find below the login information for the virtual meetings:
>>> OpenTox
>>>
>>> Please join my meeting from your computer, tablet or smartphone.
>>> https://global.gotomeeting.com/join/715561590
>>> Password: OpenToxWG
>>>
>>>
>>> You can also dial in using your phone.
>>> United States : +1 (914) 339-0034
>>>
>>>
>>> Access Code: 715-561-590
>>>
>>> More phone numbers
>>> Australia : +61 2 6108 4655
>>> Austria : +43 (0) 7 2088 1403
>>> Belgium : +32 (0) 28 08 4294
>>> Canada : +1 (416) 800-9295
>>> Denmark : +45 (0) 69 91 88 65
>>> Finland : +358 (0) 942 41 5781
>>> France : +33 (0) 182 880 459
>>> Germany : +49 (0) 898 7806 6468
>>> Italy : +39 0 699 36 98 81
>>> Netherlands : +31 (0) 208 080 382
>>> Spain : +34 931 81 6669
>>> Sweden : +46 (0) 852 503 499
>>> Switzerland : +41 (0) 435 0167 09
>>> United Kingdom : +44 (0) 20 3535 0610
>>>
>>>
>>>
>>>
>>> Thomas Exner schrieb:
>>>> Dear participants of OpenTox Euro:
>>>>
>>>> We have now scheduled the pre-conference virtual meetings to start the
>>>> working group activities. They will take place
>>>>
>>>> Wed. Sep. 9, 3pm CEST for WG2 and WG3
>>>> Wed. Sep. 9, 4pm CEST for WG1 and WG4
>>>>
>>>> Please note that we start the working groups completely from scratch.
>>>> Therefore, contributions of people not yet associated with OpenTox are
>>>> highly appreciated. We are looking for people interested in providing
>>>> new services using OpenTox standards and especially experimentalists
>>>> sharing their views on how to best organize data and make them
>>>> accessible in the most useful way.
>>>>
>>>> Best regards.
>>>> Thomas
>>>>
>>>>
>>>>
>>>>
>>>> Thomas Exner schrieb:
>>>>> Dear participants of OpenTox Euro:
>>>>>
>>>>> This is a reminder that the introduction virtual meetings on the
>>>>> opentox
>>>>> working groups will be held next week. Please register for them by
>>>>> going
>>>>> to the doodles given below.
>>>>>
>>>>> Thank you very much.
>>>>> Thomas
>>>>>
>>>>>
>>>>> Thomas Exner schrieb:
>>>>>> Dear participants of OpenTox Euro 2015:
>>>>>>
>>>>>> One topic of the conference will be the future activities of the
>>>>>> OpenTox
>>>>>> working groups on APIs (WG1), AOPs (WG2), Standards (WG3), and
>>>>>> Deployment (WG4) To get a head start, we will organize virtual
>>>>>> meetings
>>>>>> previous to the conference. These meetings will be used for a 
>>>>>> general
>>>>>> introduction and for planning the working group sessions on Wed. 
>>>>>> Sept.
>>>>>> 30. I set up two doodles to find the best dates for these meetings.
>>>>>> Please put in your availabilities for
>>>>>>
>>>>>> WG1 and WG4 at http://doodle.com/8p2umzuwvte3z8a2
>>>>>> and for WG2 and WG3 at http://doodle.com/95ywzf8n2y7f27ry
>>>>>>
>>>>>> If you cannot participate at the virtual meetings but still be
>>>>>> interested in the activities of the groups, please contact me so
>>>>>> that I
>>>>>> can send you a summary of the discussions.
>>>>>>
>>>>>> Best regards.
>>>>>> Thomas
>>>>>>
>>>>>
>>>>
>>>
>>
>
>
>
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