[OTDev] OpenTox API quiz
Nina Jeliazkova jeliazkova.nina at gmail.comSat Oct 30 08:34:09 CEST 2010
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Hello All, A quick question: Given: A publication, describing specific method of property prediction (not a generic machine learning algorithm). An implementation of this publication. Example: pKa [1]. This is a decision tree with SMARTS in the nodes. There is a training set, which could be used in validation. - Should it be exposed by OpenTox services as ot:Algorithm or ot:Model ? - What is the right way to use / extend Blue Obelisk descriptors dictionary to describe this implementation? - Would you classify this method as a descriptor calculation or as a predictive model? Best regards, Nina [1] Adam C. Lee, Jing-yu Yu and Gordon M. Crippen. pKa Prediction of Monoprotic Small Molecules the SMARTS Way, http://pubs.acs.org/doi/abs/10.1021/ci8001815
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