[OTDev] Fwd: Re: Your contribution to the Toxicology Ontology Roadmap
Nina Jeliazkova jeliazkova.nina at gmail.comTue Feb 22 07:43:28 CET 2011
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On 22 February 2011 00:05, Barry Hardy <barry.hardy at douglasconnect.com> wrote: > Was discussing this topic with Ola and we both agreed we should open it up > for discussion to OpenTox developers. Your feedback to Ola very welcome! > > Barry > > > On 20 feb 2011, at 19.18, Barry Hardy wrote: > >> Thanks Ola. >> >> I had a thought/question - you/Egon made initial progress on getting >> OpenTox services talking to Bioclipse client; what about the reverse >> problem: what would be needed for data, algs, models in Bioclipse to >> talk with OpenTox? > > Hi, > > Me and Lars at AZ thought about it too and agreed it would be nice project. > However I think it requires some work, but I don´t know the status of the > latest OpenTox frameworks for publishing models online. Are there any SDKs > available for this? The AMBIT server seems more a proof-of-concept than an > actual framework to use (needs to be recompiled for adding services). > ToxOtis is more for clients if I understand it correctly. Does it exist some > thing like SADI has for building services > (http://sadiframework.org/content/getting-involved/)? A plugin for Protege > or Java service skeleton would be very nice to have...?The best way would be > if it would be possible to drop services into a container (such as copying a > WAR file into tomcat) and the application server would set up the rest for > you. If nothing like this exist then I propose a solution based on OSGi for > dynamically adding models to a running server instance. Maybe you can > elaborate on the current status of things? > There is an initial implementation of such a skeleton at https://ambit.svn.sourceforge.net/svnroot/ambit/branches/opentox/opentox-demoserver Not completed though. If we decided this is a priority, it needs only few touches to be completed as a skeleton code. Regards, Nina > Cheers, > > /Ola > > > > _______________________________________________ > Development mailing list > Development at opentox.org > http://www.opentox.org/mailman/listinfo/development >
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