Dear Partners, Friends, Colleagues,

I just wanted to inform you that Tobias is working in a different
project from today on. He is still available with his advice
and expertise, but for practical questions please contact Jörg
Wicker (joerg.wicker at in.tum.de) and Fabian Buchwald (fabian.buchwald@
in.tum.de). Thank you!

Best regards,
Stefan

--------------------------------------------------------------
Prof. Dr. Stefan Kramer                phone: +49-89-289-19411
Technische Universitaet Muenchen         fax: +49-89-289-19414
Institut fuer Informatik/I12           email: kramer at in.tum.de
Boltzmannstr. 3                         room: MI 01.09.044
D-85748 Garching b. Muenchen, Germany
http://wwwkramer.in.tum.de
--------------------------------------------------------------

Om schrieb:
> Hi Tobias,
> 
> I would like to use the gSPAN modules from your source code for the
> structural clustering. I wish to integrate these steps locally (through
> netbeans project)  as I have large datasets to work on ( and our network
> connection is intermittent - so that uploads to ambit are likely to fail)
> and I also want to run the code as efficiently and natively as possible.
> 
> Could you please point out which source files within the source directory
> (and dependencies) contain the code to do the above ?
> 
> Also I would just like to add that I tried using the OpenTox services for
> TUM and could not get past the "The server understood the request, but is
> refusing to fulfill it" etc ... error message. I am assuming it was an A&A
> issue so i tried the following
> 
> curl -i -d "username=ompandey" -d "password=*******"
> http://opensso.in-silico.ch/auth/authenticate?uri=service=openldap
> 
> I got the token and tried (with and without url-encoding)
> 
> curl -i -d
> "subjectid=AQIC5wM2LY4SfcwnbJmuQevLWTGO%2BkNqbUaqOdwH1tW0iN0%3D%40AAJTSQACMDE%3D%23"
> -d 'dataset_uri=http://apps.ideaconsult.net:8080/ambit2/dataset/23793?max=10'
> -d 'threshold=0.50'
> http://opentox.informatik.tu-muenchen.de:8080/OpenTox-dev/algorithm/StructuralClustering
> 
> but it did not work.
> 
> Could you please enumerate the correct set of steps involved in getting the
> result from this algorithm?
> 
> Regards
> Om
> 
> On Wed, Feb 23, 2011 at 4:27 PM, Tobias Girschick <
> tobias.girschick at in.tum.de> wrote:
> 
>> Hi All,
>>
>> TUM services running on
>> http://opentox.informatik.tu-muenchen.de:8080/OpenTox-dev will be down for
>> the next 1 or 2 hours. The non-AA secured services are still available at:
>>
>> http://opentox.informatik.tu-muenchen.de:8080/OpenTox-noAA
>>
>> When the OpenTox-dev services are up again, this will be the AA secured
>> version.
>>
>> best regards,
>> Tobias
>> --
>>
>> Dipl.-Bioinf. Tobias Girschick
>>
>> Technische Universität München
>> Institut für Informatik
>> Lehrstuhl I12 - Bioinformatik
>> Bolzmannstr. 3
>> 85748 Garching b. München, Germany
>>
>> Room: MI 01.09.042
>> Phone: +49 (89) 289-18002
>> Email: tobias.girschick at in.tum.de <mailto:tobias.girschick at in.tum.de>
>> Web: http://wwwkramer.in.tum.de/girschick
>>
>> _______________________________________________
>> Development mailing list
>> Development at opentox.org
>> http://www.opentox.org/mailman/listinfo/development
>>
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